Bacterial Pathogenesis and Antibiotic Drug Discovery

AG Rybniker

German version

Research focus

The global emergence of multi-resistant bacteria is a burden on healthcare systems due to increasing morbidity and mortality. To prevent the current trend of further development of resistance to antibiotics, a comprehensive understanding of bacterial pathogenesis is essential. In our group, we work on all relevant aspects of bacterial virulence factors, pathogen-host interactions and the investigation of essential bacterial enzymes and metabolic pathways. We mainly use high-throughput molecular biology methods and our experiments always focus on potential clinical applications in the fight against multi-resistant pathogens. The focus is on multi-resistant tuberculosis pathogens, which are currently spreading rapidly in many European countries, as well as multi-resistant Gram-negative pathogens.

Host cell-based drug screening methods

In addition to the development of new antibiotics, alternative approaches such as anti-virulence and immune-supporting drugs are also needed to close the antibiotic gap that has emerged in recent decades. We have developed a drug-screening platform for Mycobacterium tuberculosis (Mtb) that enables the identification of these three classes of compounds (antibiotics with a new mechanism of action, anti-virulence drugs and immunotherapeutics) in a single approach. Our comprehensive screening approach is based on the lysis of host cells by virulence factors. Using this method, new Mtb-specific antibiotics as well as inhibitors of the ESX-1 secretion system, a major virulence factor of Mtb, have been identified. We will continue to expand this extremely successful approach and transfer it to other pathogens.

Cell death mechanisms in intracellular pathogens

Mtb is a highly successful intracellular pathogen based on its ability to manipulate innate immunity countermeasures of its major host, the human macrophage. Lytic host cell death is essential for bacterial dissemination and represents an important research topic both mechanistically and from a therapeutic perspective. Our aim is to study how Mtb modulates regulated cell death in myeloid cells and to address the functional role of different cell death pathways in Mtb infection.

Univ.-Prof. Dr. Dr.--Rybniker-Jan
Univ.-Prof. Dr. Dr. Jan Rybniker

Head of the Research Group Bacterial Pathogenesis and Antibiotic Drug Discovery

telephone icon +49 221 478-89608 (laboratory)
telephone icon +49 221 478-89611 (office)
fax icon+49 221 478-5915

Biography

Jan Rybniker (MD, PhD) is the head of the focus area for Clinical Infectious Diseases, and attending physician at the Department I for Internal Medicine. He did his PhD on transposon mutagenesis of mycobacteria and host shut off proteins of mycobacteriophages at the Institute for Medical Microbiology Cologne and the University of Tennessee (Prof. Pamela Small). In 2011, he joined Professor Stewart Cole`s group at the Ecole Polytechnique Fédérale de Lausanne (EPFL) as a postdoc where he worked on antibiotic drug discovery targeting Mycobacterium tuberculosis. In 2016, he submitted his habilitation on host cell-based antibiotic drug discovery and accepted an appointment to the professorship of Clinical Infectious Diseases in 2024. Since 2016, Prof. Rybniker is head of the Translational Research Unit – Infectious Diseases, the main research laboratory of the Infectious Diseases Department of the University Hospital Cologne. For his research, he received several awards such as the Young Investigator Award of the German Society of Internal Medicine and the Swiss TB-Award 2015.


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Team

Dr. Emmanuel Adeniyi 
Jason Chhen 
Edeltraud van Gumpel
Katharina Keck 
Dinah Lange 
Richard Lin 
Dr. Jakob Malin 
Dr. Michael Dal Molin 
Julie Mudler 
Svenja Schreib 
Priv.-Doz. Dr. Isabelle Suàrez 
Dr. Sebastian Theobald 
Sandra Winter